Publications

Authors:

Calgaro, Matteo; Romualdi, Chiara; Risso, Davide; Vitulo, Nicola

Title:

benchdamic: benchmarking of differential abundance methods for microbiome data

Year:

2023

Type of item:

Articolo in Rivista

Tipologia ANVUR:

Articolo su rivista

Language:

Inglese

Referee:

No

Name of journal:

BIOINFORMATICS

ISSN of journal:

1367-4803

Page numbers:

1-3

Keyword:

differential abundance, bioconductor, metagenomics, metabarcoding, biostatistics

Short description of contents:

A Summary: Recently, an increasing number of methodological approaches have been proposed to tackle the complexity of metagenomics and microbiome data. In this scenario, reproducibility and replicability have become two critical issues, and the development of computational frameworks for the comparative evaluations of such methods is of utmost importance. Here, we present benchdamic, a Bioconductor package to benchmark methods for the identification of differentially abundant taxa.

Product ID:

131494

Handle IRIS:

11562/1081999

Last Modified:

January 30, 2025

Bibliographic citation:

Calgaro, Matteo; Romualdi, Chiara; Risso, Davide; Vitulo, Nicola, benchdamic: benchmarking of differential abundance methods for microbiome data «BIOINFORMATICS» , 2023 , pp. 1-3

Consulta la scheda completa presente nel repository istituzionale della Ricerca di Ateneo